Quantitative recovery of nucleic acids from excised gel pieces by isotachophoresis.
نویسندگان
چکیده
method of fixing samples before antibody staining (6), and it would be interesting to assess the suitability of such samples for FISH. Quantitation of successful FISH in tissue sections is not straightforward because of sample-to-sample variation, nuclear truncation in sectioning and variations across the slide in both tissue density and section width. Accurate comparison of FISH sensitivity following microwave vs. protease treatment would require a much wider study and is not reported here. The speed and simplicity of microwaving combined with both FISH results that can be consistently scored and the low rate of sample failure make it our method of choice for prostatic tissue and should make it useful in interphase FISH on tissue sections in general.
منابع مشابه
Extraction of DNA from malaria-infected erythrocytes using isotachophoresis.
We demonstrate a technique for purification of nucleic acids from malaria parasites infecting human erythrocytes using isotachophoresis (ITP). We release nucleic acids from malaria-infected erythrocytes by lysing with heat and proteinase K for 10 min and immediately, thereafter, load sample onto a capillary device. We study the effect of temperature on lysis efficiency. We also implement pressu...
متن کاملInduced nanoparticle aggregation for short nucleic acid quantification by depletion isotachophoresis.
A rapid (<20min) gel-membrane biochip platform for the detection and quantification of short nucleic acids is presented based on a sandwich assay with probe-functionalized gold nanoparticles and their separation into concentrated bands by depletion-generated gel isotachophoresis. The platform sequentially exploits the enrichment and depletion phenomena of an ion-selective cation-exchange membra...
متن کاملOn-chip Isotachophoresis and Functionalized Hydrogel Capture for Sensitive Micro-rna Detection
We integrate on-chip isotachophoresis (ITP) and photopatterned functionalized hydrogels to perform rapid high-sensitivity detection of nucleic acids. We use ITP to enhance hybridization kinetics between target microRNAs and reporter oligos and remove excess reporters with a functionalized polyacrylamide capture gel. We achieve over 4000-fold background signal reduction, ~1 pM sensitivity, 4 ord...
متن کاملAn Injection-Molded Device for Purification of Nucleic Acids From Whole Blood Using Isotachophoresis
We present a novel microchip device for purification of nucleic acids from 25 μL biological samples using isotachophoresis (ITP). The device design incorporates a custom capillary barrier structure to facilitate robust sample loading. The chip uses relatively large channel dimensions to reduce processing time, minimize Joule heating, and achieve high extraction efficiency. To reduce pH changes ...
متن کاملIntegrated printed circuit board device for cell lysis and nucleic acid extraction.
Preparation of raw, untreated biological samples remains a major challenge in microfluidics. We present a novel microfluidic device based on the integration of printed circuit boards and an isotachophoresis assay for sample preparation of nucleic acids from biological samples. The device has integrated resistive heaters and temperature sensors as well as a 70 μm × 300 μm × 3.7 cm microfluidic c...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- BioTechniques
دوره 26 3 شماره
صفحات -
تاریخ انتشار 1999